Streptomyces xiaopingdaonensis
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces xiaopingdaonensis
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces xiaopingdaonensis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces xiaopingdaonensis
NCBI Strain Identifiers DUT180
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.47%
CheckM Contamination 0.58%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 385
N50 Contigs 30,588 bp
Longest Contig 134,187 bp
Scaffold Count 385
N50 Scaffolds 30,588 bp
Longest Scaffold 134,187 bp
Genome Size 6,466,982 bp
Protein Count 5,795
Coding Density 86.33%
GC Percentage 72.22%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name Streptomyces sulphureus L180, version 1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02469700
Country China
Date 2012-05-11
Genbank Assembly Accession GCA_000262345.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source marine sediment
Latitude Longitude None
Molecule Count N/A
CDS Count 5,712
Refseq Category na
Seq Rel Date 2012/05/11
Spanned Gaps 0
Species Taxid 1565415
SSU Count 1
Submitter Dalian University of Technology
Taxid 1565415
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AJTQ00000000.1