Escherichia dysenteriae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia dysenteriae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli Xuzhou21
NCBI Strain Identifiers Xuzhou21
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002949675.1)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 7
23S Count 7
tRNA Count 20
Contig Count 3
N50 Contigs 5,386,223 bp
Longest Contig 5,386,223 bp
Scaffold Count 3
N50 Scaffolds 5,386,223 bp
Longest Scaffold 5,386,223 bp
Genome Size 5,516,736 bp
Protein Count 5,288
Coding Density 87.46%
GC Percentage 50.40%
Ambiguous Bases 2
GTDB representative GCA_002949675.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM26212v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02603645
Country None
Date 2012-5-9
Genbank Assembly Accession GCA_000262125.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 3
CDS Count 5,731
Refseq Category na
Seq Rel Date 2012/05/09
Spanned Gaps 0
Species Taxid 562
SSU Count 7
Submitter National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention
Taxid 741093
Total Gap Length 0
Translation Table 11
tRNA Count (total) 93
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None