Sinorhizobium fredii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Sinorhizobium; s__Sinorhizobium fredii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Sinorhizobium; s__Sinorhizobium fredii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; x__Sinorhizobium/Ensifer group; g__Sinorhizobium; x__Sinorhizobium fredii group; s__Sinorhizobium fredii; x__Sinorhizobium fredii CCBAU 45436
NCBI Strain Identifiers CCBAU 45436
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001461695.1)
Genome Characteristics
CheckM Completeness 99.55%
CheckM Contamination 1.18%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 4
23S Count 4
tRNA Count 20
Contig Count 327
N50 Contigs 41,359 bp
Longest Contig 144,678 bp
Scaffold Count 327
N50 Scaffolds 41,359 bp
Longest Scaffold 144,678 bp
Genome Size 6,815,462 bp
Protein Count 6,607
Coding Density 86.04%
GC Percentage 62.21%
Ambiguous Bases N/A
GTDB representative GCA_001461695.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name 45436
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02469479
Country China
Date 2012-05-03
Genbank Assembly Accession GCA_000261885.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,815
Refseq Category na
Seq Rel Date 2012/05/03
Spanned Gaps 0
Species Taxid 380
SSU Count 4
Submitter China Agricultural University
Taxid 1128331
Total Gap Length 0
Translation Table 11
tRNA Count (total) 57
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AJQO00000000.1