Sinorhizobium fredii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Sinorhizobium; s__Sinorhizobium fredii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Sinorhizobium; s__Sinorhizobium fredii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; x__Sinorhizobium/Ensifer group; g__Sinorhizobium; x__Sinorhizobium fredii group; s__Sinorhizobium fredii; x__Sinorhizobium fredii CCBAU 05557
NCBI Strain Identifiers CCBAU 05557
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001461695.1)
Genome Characteristics
CheckM Completeness 99.65%
CheckM Contamination 1.36%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 382
N50 Contigs 36,219 bp
Longest Contig 122,926 bp
Scaffold Count 382
N50 Scaffolds 36,219 bp
Longest Scaffold 122,926 bp
Genome Size 6,587,698 bp
Protein Count 6,398
Coding Density 86.28%
GC Percentage 62.30%
Ambiguous Bases N/A
GTDB representative GCA_001461695.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name 05557
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02469489
Country China
Date 2012-05-03
Genbank Assembly Accession GCA_000261845.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,593
Refseq Category na
Seq Rel Date 2012/05/03
Spanned Gaps 0
Species Taxid 380
SSU Count 1
Submitter China Agricultural University
Taxid 1128329
Total Gap Length 0
Translation Table 11
tRNA Count (total) 52
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AJQM00000000.1