Bradyrhizobium japonicum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Xanthobacteraceae; g__Bradyrhizobium; s__Bradyrhizobium japonicum
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Bradyrhizobiaceae; g__Bradyrhizobium; s__Bradyrhizobium japonicum
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Bradyrhizobiaceae; g__Bradyrhizobium; s__Bradyrhizobium japonicum; x__Bradyrhizobium japonicum CCBAU 25435
NCBI Strain Identifiers CCBAU 25435
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000284375.1)
Genome Characteristics
CheckM Completeness 99.59%
CheckM Contamination 0.6%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 520
N50 Contigs 34,354 bp
Longest Contig 137,166 bp
Scaffold Count 520
N50 Scaffolds 34,354 bp
Longest Scaffold 137,166 bp
Genome Size 9,460,795 bp
Protein Count 9,245
Coding Density 83.98%
GC Percentage 63.48%
Ambiguous Bases N/A
GTDB representative GCA_000284375.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name 25435
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02469483
Country China
Date 2012-05-03
Genbank Assembly Accession GCA_000261605.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 9,406
Refseq Category na
Seq Rel Date 2012/05/03
Spanned Gaps 0
Species Taxid 375
SSU Count 1
Submitter China Agricultural University
Taxid 1128256
Total Gap Length 0
Translation Table 11
tRNA Count (total) 52
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AJQA00000000.1