Herbaspirillum sp000261365
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Herbaspirillum; s__Herbaspirillum sp000261365
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Oxalobacteraceae; g__Herbaspirillum; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Oxalobacteraceae; g__Herbaspirillum; s__Herbaspirillum sp. GW103
NCBI Strain Identifiers GW103
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.95%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 6
N50 Contigs 1,106,165 bp
Longest Contig 1,937,857 bp
Scaffold Count 6
N50 Scaffolds 1,106,165 bp
Longest Scaffold 1,937,857 bp
Genome Size 5,047,645 bp
Protein Count 4,462
Coding Density 87.68%
GC Percentage 62.46%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM26136v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02469572
Country South Korea
Date 2012-05-04
Genbank Assembly Accession GCA_000261365.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source rhizosphere soil
Latitude Longitude None
Molecule Count N/A
CDS Count 4,497
Refseq Category na
Seq Rel Date 2012/05/04
Spanned Gaps 0
Species Taxid 1175306
SSU Count 2
Submitter Chonbuk National University
Taxid 1175306
Total Gap Length 0
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AJVC00000000.1