Streptococcus infantis
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus infantis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus infantis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus infantis; x__Streptococcus infantis ATCC 700779
NCBI Strain Identifiers ATCC 700779
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_000187465.1)
Genome Characteristics
CheckM Completeness 98.98%
CheckM Contamination 0.34%
CheckM Strain Heterogeneity 100.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 53
N50 Contigs 67,011 bp
Longest Contig 206,953 bp
Scaffold Count 53
N50 Scaffolds 67,011 bp
Longest Scaffold 206,953 bp
Genome Size 1,857,230 bp
Protein Count 1,886
Coding Density 89.01%
GC Percentage 39.00%
Ambiguous Bases 1
GTDB representative GCA_000187465.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name SinfantisSK959v1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00761850
Country None
Date 2012-04-30
Genbank Assembly Accession GCA_000260755.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source biological product [ENVO:02000043]
Latitude Longitude None
Molecule Count N/A
CDS Count 1,917
Refseq Category na
Seq Rel Date 2012/04/30
Spanned Gaps 0
Species Taxid 68892
SSU Count 1
Submitter J. Craig Venter Institute
Taxid 889204
Total Gap Length 0
Translation Table 11
tRNA Count (total) 41
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AJTA00000000.1