Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; x__Vibrio harveyi group; s__Vibrio campbellii; x__Vibrio campbellii DS40M4
NCBI Strain Identifiers DS40M4
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 1.39%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 121
N50 Contigs 138,620 bp
Longest Contig 377,230 bp
Scaffold Count 121
N50 Scaffolds 138,620 bp
Longest Scaffold 377,230 bp
Genome Size 5,124,098 bp
Protein Count 4,806
Coding Density 85.21%
GC Percentage 45.00%
Ambiguous Bases 0
GTDB representative GCF_002163755.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM25987v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02469786
Country None
Date 2011-11-28
Genbank Assembly Accession GCA_000259875.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source open ocean water sample collected over the continental slope off the West Coast of Africa between the Cape Verde and Canary Islands
Latitude Longitude 20.68 N 24.23 W
Molecule Count 0
Protein Count 4,934
Refseq Category na
Seq Rel Date 2011/11/28
Spanned Gaps 0
Species Taxid 680
SSU Count 1
Submitter Universidade Federal Do Rio De Janeiro
Taxid 1088888
Total Gap Length 0
Translation Table 11
tRNA Count (total) 77
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AGIE00000000.1