Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; s__Xanthomonas citri
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; s__Xanthomonas citri
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; x__Xanthomonas citri group; s__Xanthomonas citri; x__Xanthomonas citri pv. glycines; x__Xanthomonas citri pv. glycines str. 12-2
NCBI Strain Identifiers 12-2
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002019225.1)
Genome Characteristics
CheckM Completeness 99.28%
CheckM Contamination 1.27%
CheckM Strain Heterogeneity 50.0
5S Count 1
16S Count 2
23S Count 1
tRNA Count 20
Contig Count 465
N50 Contigs 21,201 bp
Longest Contig 97,698 bp
Scaffold Count 465
N50 Scaffolds 21,201 bp
Longest Scaffold 97,698 bp
Genome Size 5,265,866 bp
Protein Count 4,853
Coding Density 85.86%
GC Percentage 64.36%
Ambiguous Bases N/A
GTDB representative GCA_002019225.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Xag
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02470120
Country Thailand
Date 2012-04-23
Genbank Assembly Accession GCA_000259445.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,979
Refseq Category na
Seq Rel Date 2012/04/23
Spanned Gaps 0
Species Taxid 346
SSU Count 1
Submitter Kasetsart University
Taxid 1150615
Total Gap Length 0
Translation Table 11
tRNA Count (total) 51
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AJJO00000000.1