Campylobacter_A concisus_R
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter_A; s__Campylobacter_A concisus_R
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter concisus
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter concisus; x__Campylobacter concisus UNSWCD
NCBI Strain Identifiers UNSWCD
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002913745.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.68%
CheckM Strain Heterogeneity 66.67
5S Count 0
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 86
N50 Contigs 64,047 bp
Longest Contig 129,487 bp
Scaffold Count 86
N50 Scaffolds 64,047 bp
Longest Scaffold 129,487 bp
Genome Size 1,778,912 bp
Protein Count 1,830
Coding Density 91.81%
GC Percentage 39.79%
Ambiguous Bases N/A
GTDB representative GCA_002913745.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM25931v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02471189
Country Australia
Date 2012-04-19
Genbank Assembly Accession GCA_000259315.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source intestinal biopsy
Latitude Longitude None
Molecule Count N/A
CDS Count 1,808
Refseq Category na
Seq Rel Date 2012/04/19
Spanned Gaps 0
Species Taxid 199
SSU Count 1
Submitter University of New South Wales
Taxid 929793
Total Gap Length 0
Translation Table 11
tRNA Count (total) 32
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AENQ00000000.1