Corynebacterium pseudotuberculosis
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Corynebacterium; s__Corynebacterium pseudotuberculosis
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Corynebacteriaceae; g__Corynebacterium; s__Corynebacterium pseudotuberculosis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Corynebacteriaceae; g__Corynebacterium; s__Corynebacterium pseudotuberculosis; x__Corynebacterium pseudotuberculosis 31
NCBI Strain Identifiers 31
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002155265.1)
Genome Characteristics
CheckM Completeness 99.56%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 4
23S Count 4
tRNA Count 19
Contig Count 1
N50 Contigs 2,402,956 bp
Longest Contig 2,402,956 bp
Scaffold Count 1
N50 Scaffolds 2,402,956 bp
Longest Scaffold 2,402,956 bp
Genome Size 2,402,956 bp
Protein Count 2,176
Coding Density 88.17%
GC Percentage 52.08%
Ambiguous Bases N/A
GTDB representative GCA_002155265.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM25915v3
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02603749
Country Egypt
Date 2016-6-24
Genbank Assembly Accession GCA_000259155.3
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source oedematous skin disease (OSD)
Latitude Longitude None
Molecule Count 1
CDS Count 2,159
Refseq Category na
Seq Rel Date 2016/06/24
Spanned Gaps 0
Species Taxid 1719
SSU Count 4
Submitter Rede Paraense de Genomica e Proteomica
Taxid 1087451
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None