Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Rhodococcus; s__Rhodococcus ruber
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Nocardiaceae; g__Rhodococcus; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Nocardiaceae; g__Rhodococcus; s__Rhodococcus sp. P14
NCBI Strain Identifiers P14
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001894945.1)
Genome Characteristics
CheckM Completeness 98.24%
CheckM Contamination 1.49%
CheckM Strain Heterogeneity 42.86
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 427
N50 Contigs 23,966 bp
Longest Contig 81,293 bp
Scaffold Count 427
N50 Scaffolds 23,966 bp
Longest Scaffold 81,293 bp
Genome Size 5,669,990 bp
Protein Count 5,513
Coding Density 90.91%
GC Percentage 70.42%
Ambiguous Bases N/A
GTDB representative GCA_001894945.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM25650v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02470971
Country China: Xiamen
Date 2012-03-26
Genbank Assembly Accession GCA_000256505.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source crude oil-contaminated sediments
Latitude Longitude None
Molecule Count N/A
CDS Count 5,375
Refseq Category na
Seq Rel Date 2012/03/26
Spanned Gaps 0
Species Taxid 450821
SSU Count 1
Submitter Shantou University
Taxid 450821
Total Gap Length 0
Translation Table 11
tRNA Count (total) 48
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AJFC00000000.1