Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Yersinia; s__Yersinia pestis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia pestis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; x__Yersinia pseudotuberculosis complex; s__Yersinia pestis; sb__Yersinia pestis subsp. pestis; x__Yersinia pestis subsp. pestis bv. Orientalis; x__Yersinia pestis biovar Orientalis str. AS200901434
NCBI Strain Identifiers AS200901434
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900460465.1)
Genome Characteristics
CheckM Completeness 99.82%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 237
N50 Contigs 34,682 bp
Longest Contig 83,595 bp
Scaffold Count 237
N50 Scaffolds 34,682 bp
Longest Scaffold 83,595 bp
Genome Size 4,572,981 bp
Protein Count 4,165
Coding Density 84.09%
GC Percentage 47.49%
Ambiguous Bases N/A
GTDB representative GCA_900460465.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM25587v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01831180
Country USA: Santa Fe; NM
Date 2012-03-22
Genbank Assembly Accession GCA_000255875.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source liver; spleen
Latitude Longitude None
Molecule Count N/A
CDS Count 4,280
Refseq Category na
Seq Rel Date 2012/03/22
Spanned Gaps 0
Species Taxid 632
SSU Count 1
Submitter US Army Edgewood Chemical Biological Center
Taxid 1084233
Total Gap Length 0
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AGJZ00000000.1