Zavarzinella formosa
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Planctomycetota; c__Planctomycetes; o__Gemmatales; f__Gemmataceae; g__Zavarzinella; s__Zavarzinella formosa
Filtered NCBI Taxonomy d__Bacteria; p__Planctomycetes; c__Planctomycetia; o__Planctomycetales; f__Gemmataceae; g__Zavarzinella; s__Zavarzinella formosa
Unfiltered NCBI Taxonomy d__Bacteria; x__PVC group; p__Planctomycetes; c__Planctomycetia; o__Planctomycetales; f__Gemmataceae; g__Zavarzinella; s__Zavarzinella formosa; x__Zavarzinella formosa DSM 19928
NCBI Strain Identifiers DSM 19928
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 94.89%
CheckM Contamination 2.27%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 4
23S Count 1
tRNA Count 20
Contig Count 594
N50 Contigs 51,894 bp
Longest Contig 248,242 bp
Scaffold Count 105
N50 Scaffolds 856,323 bp
Longest Scaffold 2,147,400 bp
Genome Size 10,086,423 bp
Protein Count 8,751
Coding Density 85.21%
GC Percentage 59.10%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM25570v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02469381
Country Russia: West Siberia
Date 2012-04-12
Genbank Assembly Accession GCA_000255705.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source peat soil
Latitude Longitude None
Molecule Count N/A
CDS Count 8,668
Refseq Category representative genome
Seq Rel Date 2012/04/12
Spanned Gaps 489
Species Taxid 360055
SSU Count 3
Submitter BGI-shenzhen
Taxid 1123508
Total Gap Length 230539
Translation Table 11
tRNA Count (total) 69
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AIAB00000000.1