Rickettsia helvetica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rickettsiales; f__Rickettsiaceae; g__Rickettsia; s__Rickettsia helvetica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rickettsiales; f__Rickettsiaceae; g__Rickettsia; s__Rickettsia helvetica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rickettsiales; f__Rickettsiaceae; x__Rickettsieae; g__Rickettsia; x__spotted fever group; s__Rickettsia helvetica; x__Rickettsia helvetica C9P9
NCBI Strain Identifiers C9P9
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 98.51%
CheckM Contamination 0.47%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 2
N50 Contigs 1,369,827 bp
Longest Contig 1,369,827 bp
Scaffold Count 2
N50 Scaffolds 1,369,927 bp
Longest Scaffold 1,369,927 bp
Genome Size 1,417,115 bp
Protein Count 1,668
Coding Density 81.14%
GC Percentage 32.22%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Chromosome
Assembly Name ASM25535v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02471333
Country Switzerland
Date 2012-4-5
Genbank Assembly Accession GCA_000255355.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 2
CDS Count 1,593
Refseq Category representative genome
Seq Rel Date 2012/04/05
Spanned Gaps 1
Species Taxid 35789
SSU Count 1
Submitter CNRS UMR 6236, Faculté de médecine, Université de la Méditerranée
Taxid 1144888
Total Gap Length 100
Translation Table 11
tRNA Count (total) 33
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AICO00000000.1