Marinitoga piezophila
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Thermotogota; c__Thermotogae; o__Petrotogales; f__Petrotogaceae; g__Marinitoga; s__Marinitoga piezophila
Filtered NCBI Taxonomy d__Bacteria; p__Thermotogae; c__Thermotogae; o__Petrotogales; f__Petrotogaceae; g__Marinitoga; s__Marinitoga piezophila
Unfiltered NCBI Taxonomy d__Bacteria; p__Thermotogae; c__Thermotogae; o__Petrotogales; f__Petrotogaceae; g__Marinitoga; s__Marinitoga piezophila; x__Marinitoga piezophila KA3
NCBI Strain Identifiers KA3
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 98.28%
CheckM Contamination 1.72%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 2
N50 Contigs 2,231,407 bp
Longest Contig 2,231,407 bp
Scaffold Count 2
N50 Scaffolds 2,231,407 bp
Longest Scaffold 2,231,407 bp
Genome Size 2,244,793 bp
Protein Count 2,077
Coding Density 92.19%
GC Percentage 29.14%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM25513v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02261422
Country Pacific Ocean
Date 2012-1-13
Genbank Assembly Accession GCA_000255135.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source deep-sea hydrothermal vent chimney at a depth of 2630 meters on the East-Pacific Rise
Latitude Longitude 12.13333 N 103.93333 W
Molecule Count 2
CDS Count 2,044
Refseq Category representative genome
Seq Rel Date 2012/01/13
Spanned Gaps 0
Species Taxid 149715
SSU Count 3
Submitter JGI
Taxid 443254
Total Gap Length 0
Translation Table 11
tRNA Count (total) 51
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None