Campylobacter_D jejuni
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter_D; s__Campylobacter_D jejuni
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter jejuni
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter jejuni; sb__Campylobacter jejuni subsp. jejuni; x__Campylobacter jejuni subsp. jejuni LMG 23211
NCBI Strain Identifiers LMG 23211
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457695.1)
Genome Characteristics
CheckM Completeness 99.85%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 112
N50 Contigs 65,598 bp
Longest Contig 149,599 bp
Scaffold Count 112
N50 Scaffolds 65,598 bp
Longest Scaffold 149,599 bp
Genome Size 1,672,359 bp
Protein Count 1,786
Coding Density 94.17%
GC Percentage 30.42%
Ambiguous Bases N/A
GTDB representative GCA_001457695.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM25509v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02429052
Country Belgium
Date 2012-03-16
Genbank Assembly Accession GCA_000255095.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source feces collected from farm sometime between 1998-2001
Latitude Longitude None
Molecule Count N/A
CDS Count 1,759
Refseq Category na
Seq Rel Date 2012/03/16
Spanned Gaps 0
Species Taxid 197
SSU Count 1
Submitter Cornell University
Taxid 889238
Total Gap Length 0
Translation Table 11
tRNA Count (total) 33
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AIPO00000000.1