Campylobacter_D jejuni
Isolate HQ 16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter_D; s__Campylobacter_D jejuni
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter jejuni
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter jejuni; sb__Campylobacter jejuni subsp. jejuni; x__Campylobacter jejuni subsp. jejuni 1577
NCBI Strain Identifiers 1577
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457695.1)
Genome Characteristics
CheckM Completeness 98.67%
CheckM Contamination 0.2%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 170
N50 Contigs 28,782 bp
Longest Contig 128,484 bp
Scaffold Count 170
N50 Scaffolds 28,782 bp
Longest Scaffold 128,484 bp
Genome Size 1,703,661 bp
Protein Count 1,875
Coding Density 94.15%
GC Percentage 30.32%
Ambiguous Bases N/A
GTDB representative GCA_001457695.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM25495v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02428996
Country USA: Sunnyside WA; Yakima county; farm #4
Date 2012-03-16
Genbank Assembly Accession GCA_000254955.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source dairy cow; adult
Latitude Longitude None
Molecule Count N/A
CDS Count 1,831
Refseq Category na
Seq Rel Date 2012/03/16
Spanned Gaps 0
Species Taxid 197
SSU Count 1
Submitter Cornell University
Taxid 889231
Total Gap Length 0
Translation Table 11
tRNA Count (total) 31
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AIPH00000000.1