| GTDB Taxonomy | d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter_D; s__Campylobacter_D coli |
|---|---|
| Filtered NCBI Taxonomy | d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter coli |
| Unfiltered NCBI Taxonomy | d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter coli; x__Campylobacter coli LMG 9860 |
| NCBI Strain Identifiers | LMG 9860 |
| GTDB Type Material Designation | type strain of species |
| GTDB Representative of Species | True (775 genomes in species cluster) |
| CheckM Completeness | 99.72% |
|---|---|
| CheckM Contamination | 0.11% |
| CheckM Strain Heterogeneity | 0.0 |
| 5S Count | 0 |
| 16S Count | 1 |
| 23S Count | 1 |
| tRNA Count | 18 |
| Contig Count | 187 |
| N50 Contigs | 42,746 bp |
| Longest Contig | 125,993 bp |
| Scaffold Count | 187 |
| N50 Scaffolds | 42,746 bp |
| Longest Scaffold | 125,993 bp |
| Genome Size | 1,851,478 bp |
| Protein Count | 2,044 |
| Coding Density | 93.23% |
| GC Percentage | 31.04% |
| Ambiguous Bases | N/A |
| GTDB representative of species | True |
| Assembly Level | Contig |
|---|---|
| Assembly Name | ASM25413v2 |
| Assembly Type | n/a |
| Bioproject | PRJNA224116 |
| Biosample | SAMN02428959 |
| Country | Canada |
| Date | 2012-03-16 |
| Genbank Assembly Accession | GCA_000254135.2 |
| Genome Category | Isolate |
| Genome Representation | full |
| Isolate | None |
| Isolation Source | None |
| Latitude Longitude | None |
| Molecule Count | N/A |
| CDS Count | 1,991 |
| Refseq Category | na |
| Seq Rel Date | 2012/03/16 |
| Spanned Gaps | 0 |
| Species Taxid | 195 |
| SSU Count | 1 |
| Submitter | Cornell University |
| Taxid | 887308 |
| Total Gap Length | 0 |
| Translation Table | 11 |
| tRNA Count (total) | 31 |
| Type Material | assembly from type material |
| Unspanned Gaps | 0 |
| Version Status | latest |
| WGS Master | AINS00000000.1 |