Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter_D; s__Campylobacter_D coli
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter coli; x__Campylobacter coli 1961
NCBI Strain Identifiers 1961
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000254135.2)
Genome Characteristics
CheckM Completeness 99.72%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 2
tRNA Count 18
Contig Count 127
N50 Contigs 55,220 bp
Longest Contig 98,760 bp
Scaffold Count 127
N50 Scaffolds 55,220 bp
Longest Scaffold 98,760 bp
Genome Size 1,728,167 bp
Protein Count 1,841
Coding Density 93.19%
GC Percentage 31.24%
Ambiguous Bases N/A
GTDB representative GCA_000254135.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM25389v3
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02428972
Country USA: CA
Date 2012-3-16
Genbank Assembly Accession GCA_000253895.3
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,801
Refseq Category na
Seq Rel Date 2012/03/16
Spanned Gaps 0
Species Taxid 195
SSU Count 1
Submitter Cornell University
Taxid 887298
Total Gap Length 0
Translation Table 11
tRNA Count (total) 29
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AING00000000.1