Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter_D; s__Campylobacter_D coli
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter coli; x__Campylobacter coli 80352
NCBI Strain Identifiers 80352
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000254135.2)
Genome Characteristics
CheckM Completeness 99.37%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 260
N50 Contigs 27,422 bp
Longest Contig 110,507 bp
Scaffold Count 260
N50 Scaffolds 27,422 bp
Longest Scaffold 110,507 bp
Genome Size 1,918,861 bp
Protein Count 2,133
Coding Density 93.20%
GC Percentage 31.05%
Ambiguous Bases N/A
GTDB representative GCA_000254135.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM25363v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02429019
Country USA: NC
Date 2012-03-16
Genbank Assembly Accession GCA_000253635.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,067
Refseq Category na
Seq Rel Date 2012/03/16
Spanned Gaps 0
Species Taxid 195
SSU Count 1
Submitter Cornell University
Taxid 887288
Total Gap Length 0
Translation Table 11
tRNA Count (total) 33
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AIMT00000000.1