Hyphomicrobium sp000253295
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Hyphomicrobiaceae; g__Hyphomicrobium; s__Hyphomicrobium sp000253295
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Hyphomicrobiaceae; g__Hyphomicrobium; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Hyphomicrobiaceae; g__Hyphomicrobium; s__Hyphomicrobium sp. MC1
NCBI Strain Identifiers MC1
GTDB Type Material Designation not type material
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.2%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 1
N50 Contigs 4,757,528 bp
Longest Contig 4,757,528 bp
Scaffold Count 1
N50 Scaffolds 4,757,528 bp
Longest Scaffold 4,757,528 bp
Genome Size 4,757,528 bp
Protein Count 4,619
Coding Density 87.56%
GC Percentage 59.17%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM25329v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3138412
Country None
Date 2011-6-24
Genbank Assembly Accession GCA_000253295.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 4,542
Refseq Category na
Seq Rel Date 2011/06/24
Spanned Gaps 0
Species Taxid 717785
SSU Count 1
Submitter Genoscope
Taxid 717785
Total Gap Length 0
Translation Table 11
tRNA Count (total) 48
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None