Klebsiella_A oxytoca
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella_A; s__Klebsiella_A oxytoca
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella oxytoca
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella oxytoca; x__Klebsiella oxytoca 11492-1
NCBI Strain Identifiers 11492-1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001598695.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.38%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 5
tRNA Count 20
Contig Count 212
N50 Contigs 106,308 bp
Longest Contig 285,851 bp
Scaffold Count 212
N50 Scaffolds 106,308 bp
Longest Scaffold 285,851 bp
Genome Size 6,171,098 bp
Protein Count 5,874
Coding Density 88.38%
GC Percentage 54.92%
Ambiguous Bases N/A
GTDB representative GCA_001598695.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Ko11492-1_1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02471877
Country USA: Maryland
Date 2012-03-16
Genbank Assembly Accession GCA_000252915.3
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source peri-anal swab culture
Latitude Longitude None
Molecule Count N/A
CDS Count 5,970
Refseq Category na
Seq Rel Date 2012/03/16
Spanned Gaps 0
Species Taxid 571
SSU Count 2
Submitter Institute for Genome Science
Taxid 1134455
Total Gap Length 0
Translation Table 11
tRNA Count (total) 70
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AIEM00000000.1