Rickettsia rickettsii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rickettsiales; f__Rickettsiaceae; g__Rickettsia; s__Rickettsia rickettsii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rickettsiales; f__Rickettsiaceae; g__Rickettsia; s__Rickettsia slovaca
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rickettsiales; f__Rickettsiaceae; x__Rickettsieae; g__Rickettsia; x__spotted fever group; s__Rickettsia slovaca; x__Rickettsia slovaca str. D-CWPP
NCBI Strain Identifiers D-CWPP
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001951015.1)
Genome Characteristics
CheckM Completeness 99.59%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 1
N50 Contigs 1,275,720 bp
Longest Contig 1,275,720 bp
Scaffold Count 1
N50 Scaffolds 1,275,720 bp
Longest Scaffold 1,275,720 bp
Genome Size 1,275,720 bp
Protein Count 1,466
Coding Density 81.42%
GC Percentage 32.50%
Ambiguous Bases N/A
GTDB representative GCA_001951015.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM25236v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02603557
Country None
Date 2012-3-9
Genbank Assembly Accession GCA_000252365.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 1,511
Refseq Category na
Seq Rel Date 2012/03/09
Spanned Gaps 0
Species Taxid 35794
SSU Count 1
Submitter Los Alamos National Laboratory
Taxid 1105109
Total Gap Length 0
Translation Table 11
tRNA Count (total) 33
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None