Streptococcus pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pneumoniae; x__Streptococcus pneumoniae GA47210
NCBI Strain Identifiers GA47210
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457635.1)
Genome Characteristics
CheckM Completeness 99.76%
CheckM Contamination 0.25%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 6
23S Count 4
tRNA Count 20
Contig Count 7
N50 Contigs 393,854 bp
Longest Contig 560,943 bp
Scaffold Count 7
N50 Scaffolds 393,854 bp
Longest Scaffold 560,943 bp
Genome Size 2,122,377 bp
Protein Count 2,110
Coding Density 85.33%
GC Percentage 39.59%
Ambiguous Bases 1
GTDB representative GCA_001457635.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM25180v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00718792
Country None
Date 2012-03-07
Genbank Assembly Accession GCA_000251805.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,210
Refseq Category na
Seq Rel Date 2012/03/07
Spanned Gaps 0
Species Taxid 1313
SSU Count 6
Submitter Institute for Genome Sciences
Taxid 760830
Total Gap Length 0
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AIKY00000000.1