Staphylococcus aureus
Isolate HQ 16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; sb__Staphylococcus aureus subsp. aureus; x__Staphylococcus aureus subsp. aureus CIG1612
NCBI Strain Identifiers CIG1612
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.33%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 9
23S Count 9
tRNA Count 18
Contig Count 18
N50 Contigs 685,809 bp
Longest Contig 1,451,471 bp
Scaffold Count 18
N50 Scaffolds 685,809 bp
Longest Scaffold 1,451,471 bp
Genome Size 2,959,192 bp
Protein Count 2,789
Coding Density 83.30%
GC Percentage 32.81%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM24879v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00627592
Country USA
Date 2012-02-22
Genbank Assembly Accession GCA_000248795.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source blood sample from patient with bacteremia
Latitude Longitude None
Molecule Count N/A
CDS Count 3,011
Refseq Category na
Seq Rel Date 2012/02/22
Spanned Gaps 0
Species Taxid 1280
SSU Count 11
Submitter University of Maryland
Taxid 931448
Total Gap Length 0
Translation Table 11
tRNA Count (total) 34
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AHVW00000000.1