Rickettsia rickettsii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rickettsiales; f__Rickettsiaceae; g__Rickettsia; s__Rickettsia rickettsii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rickettsiales; f__Rickettsiaceae; g__Rickettsia; s__Rickettsia sibirica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rickettsiales; f__Rickettsiaceae; x__Rickettsieae; g__Rickettsia; x__spotted fever group; x__Rickettsia sibirica subgroup; s__Rickettsia sibirica; sb__Rickettsia sibirica subsp. mongolitimonae; x__Rickettsia sibirica subsp. mongolitimonae HA-91
NCBI Strain Identifiers HA-91
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001951015.1)
Genome Characteristics
CheckM Completeness 99.17%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 21
N50 Contigs 116,057 bp
Longest Contig 188,614 bp
Scaffold Count 21
N50 Scaffolds 116,057 bp
Longest Scaffold 188,614 bp
Genome Size 1,252,337 bp
Protein Count 1,483
Coding Density 80.34%
GC Percentage 32.42%
Ambiguous Bases N/A
GTDB representative GCA_001951015.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM24762v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02471337
Country China: Alashian region of the Inner Mongolia autonomous region
Date 2012-2-14
Genbank Assembly Accession GCA_000247625.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,493
Refseq Category na
Seq Rel Date 2012/02/14
Spanned Gaps 0
Species Taxid 35793
SSU Count 1
Submitter URMITE CNRS UMR 6236 IRD 198
Taxid 1144280
Total Gap Length 0
Translation Table 11
tRNA Count (total) 33
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AHZB00000000.1