Allorhizobium sp000247475
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Allorhizobium; s__Allorhizobium sp000247475
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Rhizobium; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; x__Rhizobium/Agrobacterium group; g__Rhizobium; s__Rhizobium sp. PDO1-076
NCBI Strain Identifiers PDO-076
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.52%
CheckM Contamination 0.39%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 441
N50 Contigs 29,829 bp
Longest Contig 119,564 bp
Scaffold Count 441
N50 Scaffolds 29,829 bp
Longest Scaffold 119,564 bp
Genome Size 5,505,000 bp
Protein Count 5,401
Coding Density 88.22%
GC Percentage 60.25%
Ambiguous Bases 17
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM24747v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02470738
Country USA: Tennessee
Date 2012-02-08
Genbank Assembly Accession GCA_000247475.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source root
Latitude Longitude None
Molecule Count N/A
CDS Count 5,306
Refseq Category na
Seq Rel Date 2012/02/08
Spanned Gaps 0
Species Taxid 1125979
SSU Count 1
Submitter Oak Ridge National Laboratory
Taxid 1125979
Total Gap Length 0
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AHZC00000000.1