Staphylococcus epidermidis
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis; x__Staphylococcus epidermidis VCU129
NCBI Strain Identifiers VCU129
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_006742205.1)
Genome Characteristics
CheckM Completeness 99.67%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 36
N50 Contigs 152,156 bp
Longest Contig 256,648 bp
Scaffold Count 36
N50 Scaffolds 152,156 bp
Longest Scaffold 256,648 bp
Genome Size 2,435,484 bp
Protein Count 2,276
Coding Density 83.91%
GC Percentage 32.02%
Ambiguous Bases N/A
GTDB representative GCA_006742205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM24720v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00117464
Country None
Date 2012-2-7
Genbank Assembly Accession GCA_000247205.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,346
Refseq Category na
Seq Rel Date 2012/02/07
Spanned Gaps 0
Species Taxid 1282
SSU Count 1
Submitter J. Craig Venter Institute
Taxid 904345
Total Gap Length 0
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AHLJ00000000.1