Staphylococcus epidermidis
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis; x__Staphylococcus epidermidis VCU120
NCBI Strain Identifiers VCU120
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_006742205.1)
Genome Characteristics
CheckM Completeness 99.81%
CheckM Contamination 0.3%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 61
N50 Contigs 109,995 bp
Longest Contig 374,122 bp
Scaffold Count 61
N50 Scaffolds 109,995 bp
Longest Scaffold 374,122 bp
Genome Size 2,553,157 bp
Protein Count 2,402
Coding Density 83.06%
GC Percentage 31.84%
Ambiguous Bases N/A
GTDB representative GCA_006742205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM24706v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00117466
Country None
Date 2012-02-07
Genbank Assembly Accession GCA_000247065.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,508
Refseq Category na
Seq Rel Date 2012/02/07
Spanned Gaps 0
Species Taxid 1282
SSU Count 1
Submitter J. Craig Venter Institute
Taxid 904337
Total Gap Length 0
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AHLC00000000.1