Leptospira interrogans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans; x__Leptospira interrogans serovar Bataviae; x__Leptospira interrogans serovar Bataviae str. UT234
NCBI Strain Identifiers UT234
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900156205.1)
Genome Characteristics
CheckM Completeness 96.47%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 416
N50 Contigs 24,908 bp
Longest Contig 93,314 bp
Scaffold Count 410
N50 Scaffolds 24,931 bp
Longest Scaffold 93,314 bp
Genome Size 4,830,171 bp
Protein Count 4,073
Coding Density 76.45%
GC Percentage 35.06%
Ambiguous Bases 274
GTDB representative GCA_900156205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name CLC_glsol169
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00739391
Country None
Date 2012-2-3
Genbank Assembly Accession GCA_000246595.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,453
Refseq Category na
Seq Rel Date 2012/02/03
Spanned Gaps 6
Species Taxid 173
SSU Count 1
Submitter J. Craig Venter Institute
Taxid 1049807
Total Gap Length 99
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AHQV00000000.1