Leptospira interrogans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans; x__Leptospira interrogans serovar Icterohaemorrhagiae; x__Leptospira interrogans serovar Icterohaemorrhagiae str. P2422
NCBI Strain Identifiers P2422
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900156205.1)
Genome Characteristics
CheckM Completeness 96.47%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 426
N50 Contigs 20,884 bp
Longest Contig 84,228 bp
Scaffold Count 412
N50 Scaffolds 21,204 bp
Longest Scaffold 84,228 bp
Genome Size 4,530,019 bp
Protein Count 3,689
Coding Density 76.09%
GC Percentage 34.97%
Ambiguous Bases 514
GTDB representative GCA_900156205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name CLC_glsol073
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00739388
Country None
Date 2012-02-03
Genbank Assembly Accession GCA_000246475.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,964
Refseq Category na
Seq Rel Date 2012/02/03
Spanned Gaps 14
Species Taxid 173
SSU Count 1
Submitter J. Craig Venter Institute
Taxid 1049907
Total Gap Length 191
Translation Table 11
tRNA Count (total) 36
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AHQP00000000.1