Leptospira santarosai
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira santarosai
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira santarosai
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira santarosai; x__Leptospira santarosai serovar Arenal; x__Leptospira santarosai serovar Arenal str. 11
NCBI Strain Identifiers 11
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000313175.2)
Genome Characteristics
CheckM Completeness 98.82%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 411
N50 Contigs 24,451 bp
Longest Contig 90,800 bp
Scaffold Count 407
N50 Scaffolds 24,451 bp
Longest Scaffold 90,800 bp
Genome Size 4,013,562 bp
Protein Count 3,815
Coding Density 84.82%
GC Percentage 41.65%
Ambiguous Bases 136
GTDB representative GCA_000313175.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name CLC_glsol067
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00739380
Country None
Date 2012-2-3
Genbank Assembly Accession GCA_000246395.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,092
Refseq Category na
Seq Rel Date 2012/02/03
Spanned Gaps 4
Species Taxid 28183
SSU Count 1
Submitter J. Craig Venter Institute
Taxid 1085549
Total Gap Length 58
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AHQL00000000.1