Leptospira interrogans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans; x__Leptospira interrogans serovar Bataviae; x__Leptospira interrogans serovar Bataviae str. Kariadi-Satu
NCBI Strain Identifiers Kariadi-Satu
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900156205.1)
Genome Characteristics
CheckM Completeness 96.47%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 370
N50 Contigs 25,577 bp
Longest Contig 102,127 bp
Scaffold Count 331
N50 Scaffolds 30,451 bp
Longest Scaffold 153,537 bp
Genome Size 4,681,849 bp
Protein Count 3,848
Coding Density 75.73%
GC Percentage 35.03%
Ambiguous Bases 417
GTDB representative GCA_900156205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name CLC_glsol052
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00739373
Country None
Date 2012-2-3
Genbank Assembly Accession GCA_000246275.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,245
Refseq Category na
Seq Rel Date 2012/02/03
Spanned Gaps 39
Species Taxid 173
SSU Count 1
Submitter J. Craig Venter Institute
Taxid 1049803
Total Gap Length 675
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AHQF00000000.1