Leptospira interrogans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans; x__Leptospira interrogans serovar Bataviae; x__Leptospira interrogans serovar Bataviae str. 2006006976
NCBI Strain Identifiers 2006006976
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900156205.1)
Genome Characteristics
CheckM Completeness 96.47%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 341
N50 Contigs 30,075 bp
Longest Contig 115,482 bp
Scaffold Count 314
N50 Scaffolds 32,119 bp
Longest Scaffold 115,482 bp
Genome Size 4,708,826 bp
Protein Count 3,879
Coding Density 75.85%
GC Percentage 35.03%
Ambiguous Bases 501
GTDB representative GCA_900156205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name CLC_glsol033
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00739365
Country None
Date 2012-2-3
Genbank Assembly Accession GCA_000246115.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,269
Refseq Category na
Seq Rel Date 2012/02/03
Spanned Gaps 27
Species Taxid 173
SSU Count 1
Submitter J. Craig Venter Institute
Taxid 1049802
Total Gap Length 484
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AHPX00000000.1