Leptospira interrogans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans; x__Leptospira interrogans serovar Manilae; x__Leptospira interrogans serovar Manilae str. M933_lip32_mutant
NCBI Strain Identifiers M933_lip32_mutant
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900156205.1)
Genome Characteristics
CheckM Completeness 96.47%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 277
N50 Contigs 31,765 bp
Longest Contig 94,346 bp
Scaffold Count 271
N50 Scaffolds 32,402 bp
Longest Scaffold 94,346 bp
Genome Size 4,594,682 bp
Protein Count 3,758
Coding Density 75.85%
GC Percentage 34.96%
Ambiguous Bases 398
GTDB representative GCA_900156205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name CLC_glsol002
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00739361
Country None
Date 2012-2-3
Genbank Assembly Accession GCA_000246015.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,152
Refseq Category na
Seq Rel Date 2012/02/03
Spanned Gaps 6
Species Taxid 173
SSU Count 1
Submitter J. Craig Venter Institute
Taxid 1085547
Total Gap Length 75
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AHPS00000000.1