Dolosigranulum pigrum
Isolate HQ 5S/16S/23S 14 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Carnobacteriaceae; g__Dolosigranulum; s__Dolosigranulum pigrum
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Carnobacteriaceae; g__Dolosigranulum; s__Dolosigranulum pigrum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Carnobacteriaceae; g__Dolosigranulum; s__Dolosigranulum pigrum; x__Dolosigranulum pigrum ATCC 51524
NCBI Strain Identifiers ATCC 51524
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (14 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.18%
CheckM Contamination 2.45%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 3
23S Count 3
tRNA Count 14
Contig Count 16
N50 Contigs 207,179 bp
Longest Contig 464,303 bp
Scaffold Count 2
N50 Scaffolds 1,523,526 bp
Longest Scaffold 1,523,526 bp
Genome Size 1,862,135 bp
Protein Count 1,685
Coding Density 85.63%
GC Percentage 39.57%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name Dolo_pigr_ATCC_51524_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02463904
Country None
Date 2012-2-7
Genbank Assembly Accession GCA_000245815.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,680
Refseq Category representative genome
Seq Rel Date 2012/02/07
Spanned Gaps 14
Species Taxid 29394
SSU Count 3
Submitter Broad Institute
Taxid 883103
Total Gap Length 16107
Translation Table 11
tRNA Count (total) 22
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AGEF00000000.1