Saccharolobus islandicus
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Archaea; p__Thermoproteota; c__Thermoproteia; o__Sulfolobales; f__Sulfolobaceae; g__Saccharolobus; s__Saccharolobus islandicus
Filtered NCBI Taxonomy d__Archaea; p__Crenarchaeota; c__Thermoprotei; o__Sulfolobales; f__Sulfolobaceae; g__Sulfolobus; s__Sulfolobus islandicus
Unfiltered NCBI Taxonomy d__Archaea; x__TACK group; p__Crenarchaeota; c__Thermoprotei; o__Sulfolobales; f__Sulfolobaceae; g__Sulfolobus; s__Sulfolobus islandicus; x__Sulfolobus islandicus M.16.13
NCBI Strain Identifiers M.16.13
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000022385.1)
Genome Characteristics
CheckM Completeness 99.4%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 3
N50 Contigs 1,741,614 bp
Longest Contig 1,741,614 bp
Scaffold Count 3
N50 Scaffolds 1,741,614 bp
Longest Scaffold 1,741,614 bp
Genome Size 2,635,815 bp
Protein Count 2,980
Coding Density 87.55%
GC Percentage 35.05%
Ambiguous Bases 7
GTDB representative GCA_000022385.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM24513v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02471814
Country Russia: Kamchatka
Date 2012-1-25
Genbank Assembly Accession GCA_000245135.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Hot spring in Mutnovsky Volcano
Latitude Longitude None
Molecule Count N/A
CDS Count 2,842
Refseq Category na
Seq Rel Date 2012/01/25
Spanned Gaps 0
Species Taxid 43080
SSU Count 1
Submitter University of Illinois
Taxid 1132499
Total Gap Length 0
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AHJM00000000.1