Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Beggiatoales; f__Beggiatoaceae; g__Beggiatoa; s__Beggiatoa alba
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Thiotrichales; f__Thiotrichaceae; g__Beggiatoa; s__Beggiatoa alba
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Thiotrichales; f__Thiotrichaceae; g__Beggiatoa; s__Beggiatoa alba; x__Beggiatoa alba B18LD
NCBI Strain Identifiers B18LD
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 98.81%
CheckM Contamination 1.82%
CheckM Strain Heterogeneity 14.29
5S Count 1
16S Count 2
23S Count 1
tRNA Count 20
Contig Count 21
N50 Contigs 347,332 bp
Longest Contig 592,521 bp
Scaffold Count 3
N50 Scaffolds 4,244,785 bp
Longest Scaffold 4,244,785 bp
Genome Size 4,265,146 bp
Protein Count 3,508
Coding Density 86.23%
GC Percentage 40.74%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM24501v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02261399
Country USA
Date 2012-5-4
Genbank Assembly Accession GCA_000245015.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source rice field ditch
Latitude Longitude None
Molecule Count N/A
CDS Count 3,517
Refseq Category representative genome
Seq Rel Date 2012/05/04
Spanned Gaps 18
Species Taxid 1022
SSU Count 1
Submitter JGI
Taxid 395493
Total Gap Length 1800
Translation Table 11
tRNA Count (total) 46
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AHMA00000000.1