Saccharomonospora cyanea
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Pseudonocardiaceae; g__Saccharomonospora; s__Saccharomonospora cyanea
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Pseudonocardiales; f__Pseudonocardiaceae; g__Saccharomonospora; s__Saccharomonospora cyanea
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Pseudonocardiales; f__Pseudonocardiaceae; g__Saccharomonospora; s__Saccharomonospora cyanea; x__Saccharomonospora cyanea NA-134
NCBI Strain Identifiers NA-134
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.25%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 5
N50 Contigs 3,073,073 bp
Longest Contig 3,073,073 bp
Scaffold Count 1
N50 Scaffolds 5,408,301 bp
Longest Scaffold 5,408,301 bp
Genome Size 5,408,301 bp
Protein Count 5,108
Coding Density 90.18%
GC Percentage 69.74%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Chromosome
Assembly Name ASM24497v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02256534
Country China
Date 2012-2-3
Genbank Assembly Accession GCA_000244975.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Soil
Latitude Longitude 32.450 N 105.843 E
Molecule Count 1
CDS Count 5,092
Refseq Category representative genome
Seq Rel Date 2012/02/03
Spanned Gaps 4
Species Taxid 40989
SSU Count 3
Submitter DOE Joint Genome Institute
Taxid 882082
Total Gap Length 400
Translation Table 11
tRNA Count (total) 47
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AHLY00000000.1