Leptospira_B licerasiae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira_B; s__Leptospira_B licerasiae
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira licerasiae
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira licerasiae; x__Leptospira licerasiae serovar Varillal; x__Leptospira licerasiae serovar Varillal str. VAR 010
NCBI Strain Identifiers VAR 010
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (5 genomes in species cluster)
Genome Characteristics
CheckM Completeness 98.82%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 14
N50 Contigs 553,148 bp
Longest Contig 1,668,761 bp
Scaffold Count 14
N50 Scaffolds 553,148 bp
Longest Scaffold 1,668,761 bp
Genome Size 4,211,147 bp
Protein Count 3,876
Coding Density 91.91%
GC Percentage 41.13%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM24475v3
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02436421
Country Peru: Varillal village; Iquitos
Date 2012-04-12
Genbank Assembly Accession GCA_000244755.3
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,902
Refseq Category representative genome
Seq Rel Date 2012/04/12
Spanned Gaps 0
Species Taxid 447106
SSU Count 2
Submitter J. Craig Venter Institute
Taxid 1049972
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AHOO00000000.2