Leptospira interrogans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans; x__Leptospira interrogans serovar Grippotyphosa; x__Leptospira interrogans serovar Grippotyphosa str. UI 12769
NCBI Strain Identifiers UI 12769
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900156205.1)
Genome Characteristics
CheckM Completeness 96.47%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 94
N50 Contigs 109,759 bp
Longest Contig 413,028 bp
Scaffold Count 94
N50 Scaffolds 109,759 bp
Longest Scaffold 413,028 bp
Genome Size 4,900,685 bp
Protein Count 4,003
Coding Density 75.59%
GC Percentage 34.99%
Ambiguous Bases 3
GTDB representative GCA_900156205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name gls454107v02
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02436501
Country Laos
Date 2013-03-15
Genbank Assembly Accession GCA_000244335.3
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,395
Refseq Category na
Seq Rel Date 2013/03/15
Spanned Gaps 0
Species Taxid 173
SSU Count 1
Submitter J. Craig Venter Institute
Taxid 1049905
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AHNT00000000.2