Leptospira borgpetersenii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira borgpetersenii
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira borgpetersenii
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira borgpetersenii; x__Leptospira borgpetersenii str. UI 09149
NCBI Strain Identifiers UI 09149
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003046425.1)
Genome Characteristics
CheckM Completeness 98.82%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 1
tRNA Count 20
Contig Count 27
N50 Contigs 455,856 bp
Longest Contig 601,518 bp
Scaffold Count 27
N50 Scaffolds 455,856 bp
Longest Scaffold 601,518 bp
Genome Size 3,888,658 bp
Protein Count 3,393
Coding Density 82.29%
GC Percentage 40.08%
Ambiguous Bases N/A
GTDB representative GCA_003046425.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name LborgUI09149v2.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02436500
Country Laos
Date 2012-11-05
Genbank Assembly Accession GCA_000244215.3
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,689
Refseq Category na
Seq Rel Date 2012/11/05
Spanned Gaps 0
Species Taxid 174
SSU Count 2
Submitter J. Craig Venter Institute
Taxid 1049782
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AHNN00000000.2