Leptospira kirschneri
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira kirschneri
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira kirschneri
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira kirschneri; x__Leptospira kirschneri str. H1
NCBI Strain Identifiers H1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000243695.3)
Genome Characteristics
CheckM Completeness 97.65%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 3
23S Count 2
tRNA Count 20
Contig Count 75
N50 Contigs 158,746 bp
Longest Contig 557,243 bp
Scaffold Count 75
N50 Scaffolds 158,746 bp
Longest Scaffold 557,243 bp
Genome Size 4,594,734 bp
Protein Count 3,871
Coding Density 77.07%
GC Percentage 36.10%
Ambiguous Bases N/A
GTDB representative GCA_000243695.3
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name gls454081v2.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02436372
Country Thailand
Date 2012-10-23
Genbank Assembly Accession GCA_000243915.3
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,172
Refseq Category na
Seq Rel Date 2012/10/23
Spanned Gaps 0
Species Taxid 29507
SSU Count 3
Submitter J. Craig Venter Institute
Taxid 1049966
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AHMY00000000.2