Leptospira kirschneri
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira kirschneri
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira kirschneri
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira kirschneri; x__Leptospira kirschneri serovar Cynopteri; x__Leptospira kirschneri serovar Cynopteri str. 3522 CT
NCBI Strain Identifiers 3522 CT
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (34 genomes in species cluster)
Genome Characteristics
CheckM Completeness 97.65%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 24
N50 Contigs 415,138 bp
Longest Contig 945,915 bp
Scaffold Count 24
N50 Scaffolds 415,138 bp
Longest Scaffold 945,915 bp
Genome Size 4,409,424 bp
Protein Count 3,625
Coding Density 77.50%
GC Percentage 35.92%
Ambiguous Bases 5
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name gls454049v02
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02436434
Country Indonesia: Jakarta; Java
Date 2013-06-21
Genbank Assembly Accession GCA_000243695.3
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,935
Refseq Category representative genome
Seq Rel Date 2013/06/21
Spanned Gaps 0
Species Taxid 29507
SSU Count 1
Submitter J. Craig Venter Institute
Taxid 1049942
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AHMN00000000.2