Leptospira interrogans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans; x__Leptospira interrogans str. 2002000623
NCBI Strain Identifiers 2002000623
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900156205.1)
Genome Characteristics
CheckM Completeness 96.47%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 3
tRNA Count 20
Contig Count 73
N50 Contigs 132,976 bp
Longest Contig 315,863 bp
Scaffold Count 73
N50 Scaffolds 132,976 bp
Longest Scaffold 315,863 bp
Genome Size 4,928,546 bp
Protein Count 4,100
Coding Density 75.64%
GC Percentage 35.23%
Ambiguous Bases 1
GTDB representative GCA_900156205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Lint2002000623v2.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02436506
Country USA: Hawaii
Date 2012-11-02
Genbank Assembly Accession GCA_000243555.3
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,454
Refseq Category na
Seq Rel Date 2012/11/02
Spanned Gaps 0
Species Taxid 173
SSU Count 1
Submitter J. Craig Venter Institute
Taxid 1049930
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AHMG00000000.2