Geobacter metallireducens
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Desulfobacterota; c__Desulfuromonadia; o__Geobacterales; f__Geobacteraceae; g__Geobacter; s__Geobacter metallireducens
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Deltaproteobacteria; o__Desulfuromonadales; f__Geobacteraceae; g__Geobacter; s__Geobacter metallireducens
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Deltaproteobacteria; o__Desulfuromonadales; f__Geobacteraceae; g__Geobacter; s__Geobacter metallireducens; x__Geobacter metallireducens RCH3
NCBI Strain Identifiers RCH3
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000012925.1)
Genome Characteristics
CheckM Completeness 99.39%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 89
N50 Contigs 75,310 bp
Longest Contig 322,138 bp
Scaffold Count 89
N50 Scaffolds 75,310 bp
Longest Scaffold 322,138 bp
Genome Size 3,778,796 bp
Protein Count 3,451
Coding Density 90.87%
GC Percentage 59.83%
Ambiguous Bases N/A
GTDB representative GCA_000012925.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM24347v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02261361
Country None
Date 2012-01-23
Genbank Assembly Accession GCA_000243475.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not provided; submitted under MIGS 2.1
Latitude Longitude None
Molecule Count N/A
CDS Count 3,420
Refseq Category na
Seq Rel Date 2012/01/23
Spanned Gaps 0
Species Taxid 28232
SSU Count 1
Submitter JGI
Taxid 691164
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AGJM00000000.1