Methanotorris formicicus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Archaea; p__Methanobacteriota; c__Methanococci; o__Methanococcales; f__Methanococcaceae; g__Methanotorris; s__Methanotorris formicicus
Filtered NCBI Taxonomy d__Archaea; p__Euryarchaeota; c__Methanococci; o__Methanococcales; f__Methanocaldococcaceae; g__Methanotorris; s__Methanotorris formicicus
Unfiltered NCBI Taxonomy d__Archaea; p__Euryarchaeota; x__Methanomada group; c__Methanococci; o__Methanococcales; f__Methanocaldococcaceae; g__Methanotorris; s__Methanotorris formicicus; x__Methanotorris formicicus Mc-S-70
NCBI Strain Identifiers Mc-S-70
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.52%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 121
N50 Contigs 29,347 bp
Longest Contig 80,920 bp
Scaffold Count 121
N50 Scaffolds 29,347 bp
Longest Scaffold 80,920 bp
Genome Size 1,818,783 bp
Protein Count 2,045
Coding Density 87.06%
GC Percentage 32.44%
Ambiguous Bases 4
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM24345v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02261372
Country Indian Ocean
Date 2012-01-23
Genbank Assembly Accession GCA_000243455.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Black smoker chimney at the Kairei field in the Central Indian Ridge
Latitude Longitude None
Molecule Count N/A
CDS Count 1,994
Refseq Category representative genome
Seq Rel Date 2012/01/23
Spanned Gaps 0
Species Taxid 213185
SSU Count 2
Submitter JGI
Taxid 647171
Total Gap Length 0
Translation Table 11
tRNA Count (total) 35
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AGJL00000000.1