Clostridium_P perfringens
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium_P; s__Clostridium_P perfringens
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium perfringens
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium perfringens; x__Clostridium perfringens WAL-14572
NCBI Strain Identifiers WAL-14572
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000013285.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 10
16S Count 10
23S Count 9
tRNA Count 20
Contig Count 35
N50 Contigs 307,728 bp
Longest Contig 618,435 bp
Scaffold Count 20
N50 Scaffolds 2,084,089 bp
Longest Scaffold 2,084,089 bp
Genome Size 3,466,039 bp
Protein Count 3,177
Coding Density 83.83%
GC Percentage 28.10%
Ambiguous Bases 10
GTDB representative GCA_000013285.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Clos_perf_WAL_14572_V2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02463856
Country None
Date 2012-1-23
Genbank Assembly Accession GCA_000243175.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source biological product [ENVO:02000043]
Latitude Longitude None
Molecule Count N/A
CDS Count 3,078
Refseq Category na
Seq Rel Date 2012/01/23
Spanned Gaps 15
Species Taxid 1502
SSU Count 9
Submitter Broad Institute
Taxid 742739
Total Gap Length 3883
Translation Table 11
tRNA Count (total) 94
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ADLP00000000.1