Eubacterium_B infirmum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Peptostreptococcales; f__Anaerovoracaceae; g__Eubacterium_B; s__Eubacterium_B infirmum
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiales Family XIII. Incertae Sedis; g__; s__[Eubacterium] infirmum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; x__Clostridiales incertae sedis; f__Clostridiales Family XIII. Incertae Sedis; s__[Eubacterium] infirmum; x__Eubacterium infirmum F0142
NCBI Strain Identifiers F0142
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900450455.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 42
N50 Contigs 126,677 bp
Longest Contig 289,334 bp
Scaffold Count 13
N50 Scaffolds 1,413,062 bp
Longest Scaffold 1,413,062 bp
Genome Size 1,910,927 bp
Protein Count 1,741
Coding Density 88.83%
GC Percentage 40.10%
Ambiguous Bases 2
GTDB representative GCA_900450455.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Euba_infi_F0142_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02463880
Country None
Date 2012-1-19
Genbank Assembly Accession GCA_000242675.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source periodontal pocket
Latitude Longitude None
Molecule Count N/A
CDS Count 1,758
Refseq Category na
Seq Rel Date 2012/01/19
Spanned Gaps 29
Species Taxid 56774
SSU Count 2
Submitter Broad Institute
Taxid 883109
Total Gap Length 10103
Translation Table 11
tRNA Count (total) 43
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AGWI00000000.1